API Reference
gunshotmatch_pipeline
gunshotmatch_pipeline.config
gunshotmatch_pipeline.decision_tree
gunshotmatch_pipeline.exporters
gunshotmatch_pipeline.nist_ms_search
gunshotmatch_pipeline.peaks
gunshotmatch_pipeline.projects
gunshotmatch_pipeline.results
gunshotmatch_pipeline.unknowns
gunshotmatch_pipeline.utils
Contributing
Links
GunShotMatch Analysis Pipeline
Docs
Tests
PyPI
Activity
QA
Other
python3 -m pip install gunshotmatch-pipeline --user
python3 -m pip install git+https://github.com/GunShotMatch/gunshotmatch-pipeline@master --user
prepare_datafile
project_from_repeats
Configuration
DecisionTreeVisualiser
data_from_projects
data_from_unknown
dotsafe_name
fit_decision_tree
get_feature_names
predict_unknown
simulate_data
visualise_decision_tree
gunshotmatch_pipeline.decision_tree.export
serialise_decision_tree
deserialise_decision_tree
verify_saved_decision_tree
serialise_random_forest
deserialise_random_forest
verify_saved_random_forest
gunshotmatch_pipeline.decision_tree.predictions
PredictionResult
dump_predictions
load_predictions
verify_saved_datafile
verify_saved_project
write_combined_csv
write_matches_json
LazyEngine
PyMSNISTSearchCfg
engine_on_demand
nist_ms_search_engine
align_and_filter_peaks
prepare_peak_list
GlobalSettings
LoaderMixin
ProjectSettings
Projects
process_projects
Matches
MatchesCompounds
MatchesMetadata
compounds
compounds_from_matches
machine_learning_data
matches
unknown
unknown_machine_learning_data
UnknownSettings
filter_and_identify_peaks
process_unknown
project_plural
unknown_plural
friendly_name_mapping
NameMapping
View the Function Index or browse the Source Code.
Browse the GitHub Repository